FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006068038

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006068038
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences392034448
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCCCCCTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT12208390.3114111543585578No Hit
GAATCCCCCTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA8236950.2101078117502572No Hit
GAATCCCCCTAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC4532280.11560922829924375No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)