FastQCFastQC Report
Thu 12 May 2022
EGAF00006070069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79950392
Sequences flagged as poor quality0
Sequence length8-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGGTTG3866385248.35980291378684No Hit
GAAGGGTG2067330.25857659334553357No Hit
GCAGGTTG1453620.18181524363257656No Hit
GAAGGCTG1427310.17852445301331357No Hit
GAAGGTGG1188730.1486834486064809No Hit
GAAGGTCG1130640.14141769311149843No Hit
GACGGTTG968940.12119265156323436No Hit
GGAGGTTG864160.1080870247640562No Hit
NAAGGTTG832200.1040895459274296No Hit
GAAGGATG811840.10154296679370878No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)