FastQCFastQC Report
Thu 12 May 2022
EGAF00006070083

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070083
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160739390
Sequences flagged as poor quality0
Sequence length8-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCTATG7810501448.5910852343038No Hit
GCCCTATG2707500.1684403555345084No Hit
GTCCTAGG2239740.1393398344985632No Hit
GGCCTATG2115400.13160433170736804No Hit
NTCCTATG1673520.10411387028406666No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)