FastQCFastQC Report
Sun 5 May 2024
EGAF00006070087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47524560
Total Bases3.7 Gbp
Sequences flagged as poor quality0
Sequence length8-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGACTTA2313816248.68674638965621No Hit
GCGACTTG1066500.22441028386164966No Hit
NCGACTTA499050.10500886278589427No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)