FastQCFastQC Report
Thu 12 May 2022
EGAF00006070103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107225986
Sequences flagged as poor quality0
Sequence length8-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTGTCA5199888548.49466714160129No Hit
GGTTGCCA1789660.16690543652356807No Hit
GGCTGTCA1606000.149777125854548No Hit
GGTTGGCA1501780.14005746703975283No Hit
GGGTGTCA1487650.13873968946296283No Hit
GGTTGTCG1467690.13687820040190632No Hit
NGTTGTCA1112660.1037677564466509No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)