FastQCFastQC Report
Thu 12 May 2022
EGAF00006070109

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070109
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68810142
Sequences flagged as poor quality0
Sequence length8-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATGGCAA3271003347.53664510676347No Hit
CANGGCAA3152440.4581359532727021No Hit
NATGGCAA2402850.349199976945259No Hit
CATGGCAG1958360.2846033946565609No Hit
CATGGCAC1433640.20834719393545212No Hit
CACGGCAA1362460.1980027886005525No Hit
CATGGCCA944650.13728354171976567No Hit
CAAGGCAA897160.1303819428246493No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)