FastQCFastQC Report
Wed 11 May 2022
EGAF00006070125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40370266
Sequences flagged as poor quality0
Sequence length8-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGGTCA1913125247.3894623334907No Hit
CTNGGTCA1852870.4589689847473386No Hit
NTTGGTCA1404610.3479318169466607No Hit
CTTGGTCG1222680.30286647108047293No Hit
CTCGGTCA878530.2176180855484083No Hit
CTTGGTCC863220.21382569042274827No Hit
CTTGGTAA633160.15683820364225493No Hit
CTAGGTCA549630.13614723271825854No Hit
CTGGGTCA410490.10168127205305014No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)