FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006070483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070483
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7178553
Sequences flagged as poor quality0
Sequence length36
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGATT12700.013.22557410
CGTTGGA22100.013.205961
ACGGGAT14300.012.7945199
AACGGGA18050.012.2135068
GGAAACG22150.012.0566875
GCCACCG10500.011.8557328
AAACGGG23100.011.7507827
GAAACGG23700.011.3313956
CCCGATA1100.001399709510.9410211
GCGTGAG12650.010.43295922
CGCGATC2251.2604505E-79.99825221
ACAGGCG17150.09.96903218
CCCAAAG58000.09.7007241
CGTGAGC13500.09.66497623
AACGGGT4550.09.5584358
AATTTCG2209.906835E-79.5474445
GCGCGAT2403.223522E-79.37336120
GAGCCAC38650.09.3132526
CCCGGAT1952.3103441E-59.2577871
CGTAGAA2651.3259341E-79.0831111
Produced by FastQC (version 0.11.5)