FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006070583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8815833
Sequences flagged as poor quality0
Sequence length36
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA2452.5465852E-1111.6383741
CCCGATA1202.3367998E-411.2555331
CCCGCAT1901.571605E-610.2682061
CCCAAAG70550.09.4234851
AACGGGA19200.09.3743988
CGTTGGA20750.09.3298871
CCCGCAC2905.8807927E-99.3149241
GCGCAAT2105.6777208E-69.28522320
CACCGCG4550.09.23059530
GCGTGAG14000.09.21390222
AAACGGG23950.09.1434627
ACGGGAT14500.09.1028639
CCCTAAA23600.09.0934531
CGGGATT13400.08.95464810
CGTGAGC14550.08.8656123
ACAGGCG18250.08.79405518
CCCAAGT26700.08.655941
TCGGAAG4700.08.6179833
GGAAACG23350.08.6089025
GCCACCG12100.08.55355728
Produced by FastQC (version 0.11.5)