FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006070737

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070737
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6174605
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCTCG7850.024.07475339
GATCGGA8050.023.8211151
CTCGTAT8550.022.1037242
TCTCGTA8650.021.84818541
ATCTCGT8900.021.48726340
CGTATGC9600.019.68612744
TCGTATG9850.019.41488843
ATCGGAA10350.018.9164712
ACACGTC10850.017.20952413
TCGGAAG11150.016.9534683
CGGAAGA11700.016.1565134
TATGCCG4750.016.1041445
CGTTGGA16000.016.0739971
CGTCTGA12100.015.24637616
GTATGCC12950.015.11477545
AAACGGG17850.014.1156337
GAAACGG18250.014.0565456
ACGTCTG13350.013.98733515
AACGGGT4600.013.6936978
CACGTCT13850.013.48237614
Produced by FastQC (version 0.11.5)