FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006070776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7074475
Sequences flagged as poor quality0
Sequence length36
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA2100.019.3209481
ACACGTC3400.012.79203513
CGTCTGA3200.012.65418916
CGTTGGA15250.012.5146241
TCGGAAG3650.012.3350433
ATCGGAA3450.011.7477652
ACGGGAT9750.011.2289419
ACGTCTG3750.011.19817715
AACGGGA13400.011.1922078
AAACGGG16950.010.7062227
GAAACGG16950.010.2638876
CGGGATT9650.010.25739810
GGAAACG16750.010.2140065
CACGTCT4650.09.99837214
GCGTGAG11800.09.65944522
CGGAAGA4250.09.5341274
CGGGATA2105.685064E-69.28420310
CGTGAGC13000.09.22926623
CCCTGCG2854.292997E-88.9637141
CCCTATT11850.08.8769471
Produced by FastQC (version 0.11.5)