FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006070787

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070787
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6080804
Sequences flagged as poor quality0
Sequence length36
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTGGA14200.011.7526471
ACGGGAT10250.010.9732999
CGGGATA1807.912495E-710.83105310
GATCGGA1253.3530113E-410.8251421
AAACGGG16250.010.7977277
AACGGGA13050.010.6874058
GCGTGAG10750.010.462913522
GCCACCG10400.010.23822928
CGATGAA3253.6379788E-1210.1774841
CCCCGAA2105.0959534E-710.0232791
CGTGAGC11400.09.99789523
GAAACGG17100.09.9113356
CGGGATT9750.09.69026810
ACAGGCG15650.09.4868218
ATAGGCG1757.4493364E-59.42658618
CCCAAAG52100.09.4076461
GGAAACG16650.09.2829755
AACGGGT3801.0913936E-119.0770378
GAGCCAC34050.09.0729826
CCCAAGT18550.08.91558551
Produced by FastQC (version 0.11.5)