FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006070800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12117540
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGGGAT23850.011.509449
ACCGCGC8700.010.86319531
CGGGATT23050.010.83505710
AAACGGG39500.010.7086017
AACGGGA33400.010.6446418
CGTTGGA38550.010.6254671
CGCGCCC6450.010.46546733
CGCCCGG11800.010.10585435
CCGCGCC8950.010.05620332
GAAACGG41250.010.0361216
GGAAACG42500.09.689245
CACCGCG10450.09.25952430
GCGTGAG28150.08.71136222
CCCGATT3704.6672703E-68.5158381
GCCACCG27850.08.4835128
CGGCTAA12750.08.47062839
GCCCGGC25350.08.43185336
ACGCCCG5902.2009772E-108.38976634
CCCGAAT10850.08.2971951
ACCACGC21100.08.21175331
Produced by FastQC (version 0.11.5)