EGAF00006070851 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00006070851
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8303146
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCCG	113999	1.3729615256674998	TruSeq Adapter, Index 3 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	13025	43.756813	45
ATCGGAA	13265	43.713085	1
ACACGTC	13350	43.446346	12
CTCGTAT	13120	43.26431	41
TCGGAAG	13435	43.19348	2
CGTCTGA	13370	43.162334	15
TCTCGTA	13230	43.12566	40
CGTATGC	13255	43.06545	43
TCGTATG	13285	42.883514	42
CGGAAGA	13555	42.866	3
ACGTCTG	13475	42.859398	14
CATCTCG	13360	42.655506	38
GCACACG	13675	42.627678	10
ATCTCGT	13380	42.591747	39
CACGTCT	13665	42.362774	13
CACACGT	13895	41.855602	11
GTATGCC	13735	41.593193	44
CTTAGGC	14345	40.07402	32
GCATCTC	14690	38.99267	37
GGCATCT	14670	38.923138	36