FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006070913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006070913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10155873
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCCGC2905.456968E-1213.96490933
ACGTCCG2752.910383E-1113.90848432
TCCGCAC3450.013.04252535
CGTTGGA29300.012.68127251
AACGGGA25650.012.2803498
ACGGGAT18800.012.0874199
CGGGATT17200.012.03436110
GAAACGG31450.011.6613766
AAACGGG31600.011.5345917
GGAAACG33350.010.9970095
GTCCGCA3754.5474735E-1010.79921134
CACCGCG6850.010.18238930
CCCCGTT4458.0035534E-1110.1208391
TCTCGTA4551.2369128E-109.89011843
ACCGCGC7100.09.82380631
CGCCCGG9900.09.54475735
CCCGAAC2150.00119665119.4265021
GCCACCG19900.09.04514428
GCGTGAG22350.08.95907722
CCCCGAT2801.4880924E-48.8466971
Produced by FastQC (version 0.11.5)