FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071011

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071011
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6033194
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC4550.013.34896531
ACGCCCG2602.6775524E-912.97859234
TCTCGAC1403.6228783E-412.85189510
CACCGCG4900.012.39413230
CGTTGGA15450.012.2758341
AACGGGA13200.012.0973348
CGCGCCC3001.7462298E-911.99798633
CGCGCCT1902.9572528E-511.84011733
CGCCCGG5350.011.77382335
AAACGGG16750.011.010437
GAAACGG16400.010.9713126
ACGGGAT9650.010.9540779
CCGCGCC4750.010.89263832
CGGGAAT5700.010.65354510
CCCCGAA2554.4941953E-610.6253011
CCGGCTA5059.094947E-129.79919838
CGGGCGG2109.7576616E-49.63900123
ACAGGCG18900.09.63892218
CGTGAGC14250.09.62772823
GCGTGAG13800.09.61571922
Produced by FastQC (version 0.11.5)