FastQCFastQC Report
Wed 27 Apr 2022
EGAF00006071085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12923926
Sequences flagged as poor quality0
Sequence length36
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTT835220.6462587297389353TruSeq Adapter, Index 12 (100% over 36bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTG817460.6325167754751922TruSeq Adapter, Index 12 (100% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)