Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00006071092 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8874118 |
Sequences flagged as poor quality | 0 |
Sequence length | 36 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 275 | 0.0 | 20.21311 | 1 |
GTCACGC | 390 | 0.0 | 14.229304 | 29 |
ATCGGAA | 395 | 0.0 | 14.051958 | 2 |
AGTCACG | 440 | 0.0 | 13.63496 | 28 |
ACACGTC | 460 | 0.0 | 12.716082 | 13 |
CGTCTGA | 465 | 0.0 | 12.2568035 | 16 |
GCGTGAG | 1620 | 0.0 | 11.758115 | 22 |
ACGGGAT | 1230 | 0.0 | 11.706838 | 9 |
TCGGAAG | 530 | 0.0 | 11.604868 | 3 |
CGTTGGA | 2025 | 0.0 | 11.499283 | 1 |
AACGGGA | 1715 | 0.0 | 11.195066 | 8 |
ACAGGCG | 2200 | 0.0 | 11.112493 | 18 |
CGTGAGC | 1710 | 0.0 | 11.051557 | 23 |
CGGGATA | 245 | 3.2014214E-10 | 11.019957 | 10 |
AAACGGG | 2245 | 0.0 | 10.890607 | 7 |
GAAACGG | 2275 | 0.0 | 10.418976 | 6 |
CGGAAGA | 585 | 0.0 | 10.257551 | 4 |
ACGTCTG | 585 | 0.0 | 10.255355 | 15 |
CACGTCT | 665 | 0.0 | 9.92379 | 14 |
AGGCGTG | 2170 | 0.0 | 9.814657 | 20 |