FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10713227
Sequences flagged as poor quality0
Sequence length36
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA1507.381641E-813.0028321
ACGGGAT16750.012.894969
AACGGGA22750.012.2632038
CGTTGGA26150.011.8763911
CCCCGAT2301.05501385E-1011.7416891
CGGGATT15550.011.67151710
CACCGCG7050.011.27673530
AAACGGG29750.011.2432077
GAAACGG30100.010.8134836
GGAAACG29450.010.4411185
GCGTGAG18450.010.00026522
GCCACCG16950.09.911674528
ACAGGCG24600.09.694718
ACGGGTA3001.0550139E-99.4995859
CGTGAGC19600.09.490046523
CCCAAAG85550.09.4877481
CCCTAAA27850.09.3736751
CCTACGG2601.0318399E-79.232781
ACGCTAG1500.00182515649.0000727
GAGCCAC55800.08.92492626
Produced by FastQC (version 0.11.5)