FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071183

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071183
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11105714
Sequences flagged as poor quality0
Sequence length36
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA8150.014.498721
ACACGTC8950.013.9052413
CGTCTGA8950.013.40270216
ACGTCTG9650.012.43048615
TCGGAAG10050.012.3843
CGTTGGA26600.012.3586431
ATCGGAA9850.012.3309832
ACGGGAT18050.011.7959959
AACGGGA22900.011.1965478
CGTCGAT1501.2205101E-511.1094891
AAACGGG28850.010.9143287
CACGTCT11350.010.83281814
CGGGATT17350.010.7163210
GGAAACG29150.010.59686855
CGTGAGC18350.010.54221423
GAAACGG30250.010.508626
CGGAAGA12150.010.4903884
GCGTGAG18100.010.27356822
GCACACG13350.09.99613811
CGAGAGT2156.341397E-79.8646631
Produced by FastQC (version 0.11.5)