FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7117917
Sequences flagged as poor quality0
Sequence length36
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGGGAT14700.013.9768699
CGTTGGA21800.013.7861931
CGGGATT14050.013.55607810
AACGGGA19500.012.4591118
CCCGCGT850.00257959612.3751361
AAACGGG24300.012.0975987
GAAACGG24450.011.9681746
GGAAACG24100.011.520215
GCCACCG10350.011.44736728
CGGGATA2002.2388122E-811.24780810
ACTATCG1253.4291134E-410.7989587
ACAGGCG16600.010.5702318
CCCGCAA1602.7249567E-510.3310281
GCGTGAG11950.010.03988522
GCTAGAC12400.09.67662129
GTTGGAA35550.09.413932
GCGCTTG4850.09.2829335
CCTCGAT1809.9127035E-59.1831361
AACGGGT5000.08.9982468
CGTGAGC12350.08.98635623
Produced by FastQC (version 0.11.5)