FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10529235
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGGGAT19950.012.8509469
CGTTGGA32350.012.3507141
AAACGGG32650.012.1227927
AACGGGA27550.012.0812888
GAAACGG34100.011.4785126
CGGGATT19600.011.12983810
GGAAACG35050.010.8139055
CGGGATA5403.6379788E-129.57871510
ACGCCCG5101.10958354E-109.26063634
GCGTGAG25950.08.92641622
AACGGGT6900.08.8001048
ACAGGCG37050.08.55862718
CGTGAGC27950.08.52906323
GCCACCG24250.08.44115428
CCCCGTT4601.3700992E-78.3422681
CCCGATT5301.87556E-88.0922781
GCGAATT3104.378618E-48.0055692
CCCCGAT4001.27576695E-57.9006191
CCCCGGA6602.4374458E-107.8664171
ACCACGC22350.07.749819331
Produced by FastQC (version 0.11.5)