FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4533459
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC2957.2759576E-1213.71873931
CGTTGGA15850.013.4160351
GGCGTAA1352.6724342E-413.32281421
AACGGGA13200.013.2854058
AGGCGTA1200.001667597213.11464620
CACCGCG3303.6379788E-1212.9450430
AAACGGG15500.012.6197647
ACGGGAT10250.012.283399
GAAACGG16350.012.1044086
GGAAACG16950.012.001415
ACGCCCG3153.783498E-911.42207434
CGGGATT9850.010.95617910
CGCCCGG5750.010.95029335
CCGCGCC3754.6020432E-1010.79243232
CCCGTAA2005.911232E-410.1797731
GCGTGAG11150.09.88205322
GCCACCG10700.09.87734128
ACAGGCG15950.09.725862518
CGCGCCC3502.1525739E-79.63737633
CGTGAGC11450.09.426743523
Produced by FastQC (version 0.11.5)