FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7879640
Sequences flagged as poor quality0
Sequence length36
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATCGAT2051.8639184E-811.3883541
ATAGGCG3050.011.29542118
CGTTGGA19100.010.75633051
CGGGATA2651.1277734E-1010.73924810
ACGGGAT12450.010.7074689
AAACGGG21000.010.5562247
AACGGGA16800.010.5205618
GCGTGAG15550.010.40506822
TAGGCGT2752.2191671E-1010.34938619
CGTGAGC16450.010.20060223
CGTTAAT2206.0008824E-79.9044171
CCCTAAA20000.09.8831931
GAAACGG21350.09.82191856
CGGGATT11400.09.72283710
CCCAAAG67200.09.5191051
ACAGGCG22250.09.35748718
GGAAACG20950.09.2944885
GCCACCG13450.09.24994128
CCCAAGT28400.09.2069221
CCCCGTT3057.477865E-99.1853611
Produced by FastQC (version 0.11.5)