FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5804289
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT2750.020.45050442
TCTCGTA2850.018.15430641
CGCCAAT3350.014.77319933
TCGTATG3850.014.02320443
TATCTCG3800.013.6157339
CGTATGC3500.013.49733444
GTCACGC3600.013.12240829
CGTTGGA15400.012.730791
AAACGGG17100.012.2344257
ACGCCAA4100.012.070785532
GATCGGA3551.2732926E-1112.0609661
ATCTCGT4300.012.03250640
GGAAACG17150.011.8237855
AACGGGA12950.011.8123388
GAAACGG17650.011.4721066
ACGGGAT9500.010.8925859
CCCGTAA2801.2349919E-610.4626621
ACGGGTT3704.1909516E-910.3357959
ACACGTC4803.6379788E-1210.31046213
AACGGGT4458.185452E-1110.1103628
Produced by FastQC (version 0.11.5)