FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071903

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071903
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6443722
Sequences flagged as poor quality0
Sequence length36
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA1551.5173482E-611.6313531
CGTTGGA15850.011.5640851
CGTAGAA1851.1001157E-610.5572871
GCGAACA1000.00879486410.49832218
AACGGGA13750.010.361988
CGGGAGT2053.789155E-710.2422659
AAACGGG17050.010.2045977
ACGGGAT10450.010.0462419
GGAAACG17300.09.7146325
GAAACGG17850.09.6670476
CGGGATT9900.09.54392910
CCCCGGA2157.4941436E-69.0841781
CCCTAAT9850.08.9990461
GATTTCG6350.08.9797515
CGTGAGC10250.08.77928823
CCCCGAC1550.0024231588.72351551
CCCAAAG46900.08.6811481
CCCGAAA1757.5865485E-48.5850471
GCGTGAG10200.08.528048522
CCCTATT12900.08.501861
Produced by FastQC (version 0.11.5)