FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006071966

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006071966
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7264074
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGTA3800.014.20756341
CTCGTAT3800.013.615581542
CGTATGC4000.013.49718544
CGTTGGA18550.012.6344481
TCGTATG4650.011.61048243
AACGGGA17100.011.0503278
AAACGGG20950.010.9523717
GAAACGG21400.010.7234666
CGGGATT12200.010.69449110
ACGGGAT12500.010.6177859
GGAAACG22350.09.8803095
ATCTCGT5500.09.81613540
GGCGAAT2109.583178E-49.6580651
GATCGGA5659.094947E-129.1737381
CGGGAAT8700.09.04983710
CCCCGAA3258.266055E-69.0141941
ATCGGAA6351.8189894E-128.8721762
ACGCCCG3552.6860307E-68.8714534
CCCGAAA4102.1750748E-78.7943351
CGAGAGT2400.00323070458.4508071
Produced by FastQC (version 0.11.5)