FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006072156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006072156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10802525
Sequences flagged as poor quality0
Sequence length36
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGGGAT19300.012.3567189
CGTTGGA27550.012.1996271
AACGGGA24950.011.8426518
AAACGGG31050.011.4965257
GAAACGG30100.011.311256
CGGGATT16850.011.21589710
GGAAACG30700.010.7013225
ACAGGCG24350.09.85526418
GCGTGAG18750.09.44039722
CGTGAGC20450.09.09586423
CGGGATA4150.09.035562510
CCCCGAT2003.2121374E-59.0026711
GCCACCG16750.08.95560128
CCCAAAG86350.08.9140521
CCCAAGT36550.08.7440451
CGATAAA4159.094947E-128.6772741
ATAGGCG3501.8590072E-98.5705618
CCCTAAA25650.08.5405451
GAGCCAC50750.08.51283226
CCCGCGC1600.0032685428.4400041
Produced by FastQC (version 0.11.5)