FastQCFastQC Report
Thu 12 May 2022
EGAF00006072331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006072331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84955822
Sequences flagged as poor quality0
Sequence length8-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACTCTT4141228748.74567278037755No Hit
NGACTCTT2488550.29292283229276506No Hit
TTCCGTTCGTCTTCCTCCCTCCCGGCCTCTCCCGCCGACCGCGGGCGTGG2072060.2438985288141877No Hit
GGGCTCTT1677170.19741672324705423No Hit
TCCGTTCGTCTTCCTCCCTCCCGGCCTCTCCCGCCGACCGCGGGCGTGGT1552010.18268436034907648No Hit
GGCCTCTT1463470.1722624730768893No Hit
CTTCCGTTCGTCTTCCTCCCTCCCGGCCTCTCCCGCCGACCGCGGGCGTG1061290.12492257446464351No Hit
CCCGGCCTCTCCCGCCGACCGCGGGCGTGGTGGTGGGGGTGGGGGGGAGG921780.10850109837086856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)