FastQCFastQC Report
Thu 12 May 2022
EGAF00006072332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006072332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84955822
Sequences flagged as poor quality0
Sequence length8-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATCCAC4158040048.9435556282417No Hit
NCATCCAC2849500.3354096203083056No Hit
GCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGG2220630.26138644153192936No Hit
GAATACAAGCTTGGGCTGCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAA1825670.21489639638823105No Hit
CGCGCGCCCTCCCCCCCACCCCCACCACCACGCCCGCGGTCGGCGGGAGA1070030.12595134445288517No Hit
GGGCTGCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGG1062280.12503910561891804No Hit
GCTGCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGC1008260.11868050667557545No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)