FastQCFastQC Report
Sun 15 May 2022
EGAF00006072341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006072341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62917944
Sequences flagged as poor quality0
Sequence length8-151
%GC45

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACATGC3089875549.109606950920075No Hit
NGACATGC1878860.2986206923735461No Hit
TGCCATGC963980.15321225372526476No Hit
TTCCGTTCGTCTTCCTCCCTCCCGGCCTCTCCCGCCGACCGCGGGCGTGG793880.12617704100439137No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)