FastQCFastQC Report
Wed 11 May 2022
EGAF00006072342

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006072342
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55208674
Sequences flagged as poor quality0
Sequence length8-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCACTAA2695289648.82003867725568No Hit
NGCACTAA1866790.33813346069496253No Hit
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCACTAAATCTCGTA727540.1317800170313817TruSeq Adapter, Index 22 (97% over 38bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)