FastQCFastQC Report
Sun 15 May 2022
EGAF00006075369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006075369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53757991
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCAAGAAAGCGAGCTTAGTGATACTTGTGGGCCAGGGCATTAGCCACA608850.1132575806264784No Hit
CTCAGGTCGAAGTGCGGGAAGTAGGTCTTGGTGGTGGGGAAGGACAGGAA608140.11312550723854245No Hit
CTTAGGGTTGCCCATAACAGCATCAGGAGTGGACAGATCCCCAAAGGACT539390.10033671087150559No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)