FastQCFastQC Report
Thu 12 May 2022
EGAF00006075529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006075529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34742833
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTAAGTTTCAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACTTT428200.12324844090866165No Hit
CTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCA378120.10883395720780743No Hit
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCT370840.10673856101487175No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)