FastQCFastQC Report
Sun 15 May 2022
EGAF00006075586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006075586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27446609
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC753250.27444191739679025No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT612870.22329534406235757No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG499910.1821390759055153No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)