Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00006075720 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 80389043 |
Total Bases | 8.1 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGGCTATAGTGTAGATCTC | 1016755 | 1.264793014142487 | Illumina Single End PCR Primer 1 (96% over 33bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGGCTATAGTGTAGATCT | 307472 | 0.38247998548757445 | Illumina Single End PCR Primer 1 (97% over 34bp) |
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC | 192330 | 0.23924902302917078 | No Hit |
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT | 128715 | 0.16011510424374625 | No Hit |
CTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAG | 96506 | 0.12004869867650993 | No Hit |
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG | 93442 | 0.11623723397229645 | No Hit |
CATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCT | 81677 | 0.101602154910589 | No Hit |
CCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGC | 81368 | 0.10121777416855181 | No Hit |