FastQCFastQC Report
Sun 15 May 2022
EGAF00006075766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006075766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49006446
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1627250.33204815546101835No Hit
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC801760.1636029676585811No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT620950.12670782125273888No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)