FastQCFastQC Report
Wed 11 May 2022
EGAF00006075838

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006075838
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37385568
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC1281270.3427178102523412No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG559160.14956573616856644No Hit
CTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTC395450.10577611125234208No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)