FastQCFastQC Report
Thu 12 May 2022
EGAF00006075924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006075924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51235358
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGACCTGGGACAGAGGACTGCTGTCTGCCCTCTCTGGTCACCCTGCC2348870.4584470747720744No Hit
CTGGGACAGAGGACTGCTGTCTGCCCTCTCTGGTCACCCTGCCTAGCTAG1595020.31131235581490424No Hit
CCTGGGACAGAGGACTGCTGTCTGCCCTCTCTGGTCACCCTGCCTAGCTA963440.1880420158282099No Hit
CTCGGCTTTGACAGAGTGCAAGACGATGACTTGCAAAATGTCGCAGCTGG926490.1808301993322658No Hit
GAAGACCTGGGACAGAGGACTGCTGTCTGCCCTCTCTGGTCACCCTGCCT740290.14448810916867214No Hit
CTGCTGTCTGCCCTCTCTGGTCACCCTGCCTAGCTAGAGGATCTGTGACC709900.13855665847011356No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)