FastQCFastQC Report
Wed 11 May 2022
EGAF00006075959

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006075959
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22658583
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAACTTCATCCACGTTCACCTTGCCCCACAGGGCAGTAACGGCAGAC271630.11987951762032076No Hit
CTTTAATAGAAATTGGACAGCAAGAAAGCGAGCTTAGTGATACTTGTGGG250660.1106247464812782No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)