FastQCFastQC Report
Wed 11 May 2022
EGAF00006076068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006076068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42753820
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT1640900.3838019620235104No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG828300.1937370742544175No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA548260.12823649442318838No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)