FastQCFastQC Report
Thu 12 May 2022
EGAF00006076174

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006076174
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60508260
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT1287840.21283705728771576No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1256590.20767247314664147No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG723610.11958863137032862No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)