FastQCFastQC Report
Wed 11 May 2022
EGAF00006076262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006076262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39113545
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT879110.22475845643753334No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG585490.14968983251198528No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG454210.11612601210143443No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)