FastQCFastQC Report
Sat 1 Apr 2023
EGAF00006127115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006127115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76834880
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGTCTTCACATTCT1504110.19575874915142705No Hit
GCGTAGCCAGCACATT1296410.1687267553486125No Hit
GTCACGGTCCGATGCG1116600.14532462340020574No Hit
GAAGTCTGTATCTGCA1032550.1343855811319026No Hit
TGCATTTAGGAAGAAC941200.12249644952917217No Hit
CAGCTGGAGAATATCG832780.10838567067456863No Hit
TTGTTCAAGTAACACA814190.10596619660237641No Hit
GTGCACGGTAGAAAGG800540.1041896596962213No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)