FastQCFastQC Report
Mon 3 Apr 2023
EGAF00006127134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006127134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72059345
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACAGACTTTCATCTCGTATGCCGTC1611380.22361846336516103No Hit
CTTATACACATCTCCGAGCCCACGAGACAGACTTTCATCGCGTATGCCGTC830680.11527720658576622No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)