EGAF00006127144 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00006127144
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	97744551
Sequences flagged as poor quality	0
Sequence length	31
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTCTGCAAAAAAAAAAAAAAAAAAAAAAAA	300931	0.3078749627690244	No Hit
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	283982	0.2905348657236146	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	257284	0.2632208111529409	No Hit
TCCGAATTCAAAAAAAAAAAAAAAAAAAAAA	217815	0.2228410666084087	No Hit
ATATGGGTGTAAAAAAAAAAAAAAAAAAAAA	209142	0.21396793771143313	No Hit
GTAGTCACAGCGAAAAAAAAAAAAAAAAAAA	197858	0.2024235601634714	No Hit
TTCTCAGATGTAAAAAAAAAAAAAAAAAAAA	181815	0.18601036900768003	No Hit
TACGATGGGACAAAAAAAAAAAAAAAAAAAA	171343	0.1752967283056014	No Hit
CCTCTGCAATAAAAAAAAAAAAAAAAAAAAA	170484	0.1744179069378507	No Hit
TACAAAAAAAAAAAAAAAAAAAAAAAAAAAA	170464	0.17439744543918362	No Hit
CATTTACGAGACCCGAAAAAAAAAAAAAAAA	165900	0.16972813144335788	No Hit
CATCATCTTACAAAAAAAAAAAAAAAAAAAA	163857	0.16763798935451657	No Hit
TTGCTCGAAAAAAAAAAAAAAAAAAAAAAAA	155629	0.15922012880288336	No Hit
CTGAGGCCCAAAAAAAAAAAAAAAAAAAAAA	154409	0.157971977384192	No Hit
TACGATGGGACAATCAAAAAAAAAAAAAAAA	152859	0.15638621123749394	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	139505	0.14272406857749032	No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	126168	0.1290793181913537	No Hit
ATAGTCACAGCGAAAAAAAAAAAAAAAAAAA	120506	0.12328666791870577	No Hit
GTGCCACTCAAAAAAAAAAAAAAAAAAAAAA	110686	0.11324007207317366	No Hit
TTCTCAGATGTAATGAAAAAAAAAAAAAAAA	108679	0.11118676068193306	No Hit
TGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA	98687	0.10096419594786414	No Hit
ATATGGGTGTAACAAAAAAAAAAAAAAAAAA	98335	0.10060407357132368	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCGCG	30950	24.917187	2
ATGGCGC	27685	24.872845	1
TGGGCCG	15060	24.672403	1
GGCGCCT	20740	24.640356	2
TGCCGAT	19405	24.551056	2
GCGGGCC	16735	24.531284	5
GCGCCTG	33120	24.503704	3
GGCCGGG	14080	24.497704	1
GCCGATG	19760	24.49582	3
CGCGGCG	4905	24.492107	4
ACGGGCG	5870	24.49078	5
ACGCGGG	16115	24.485153	1
TGCGGGC	12215	24.439117	6
GGGCCGT	10115	24.408781	2
GCGCGCA	18315	24.394358	4
GGGCGAA	9970	24.371424	8
AGCGCGC	18365	24.368883	3
GCGGGCA	11715	24.368769	9
CGGCCGT	10060	24.353996	1
GAGCCGG	8595	24.34743	3