EGAF00006127145 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00006127145
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	97744551
Sequences flagged as poor quality	0
Sequence length	46
%GC	26

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14272836	14.602180739466489	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	920460	0.9416995531546306	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	891549	0.9121214337564455	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	870978	0.8910757593024291	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	590242	0.6038617948124801	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	280825	0.2873050181590174	No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	237587	0.24306930419067557	No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	222898	0.2280413564946449	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	137901	0.1410830563843912	No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	98025	0.10028692034198408	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACGCT	4650	18.87192	1
GACGCTC	5645	14.97675	2
CGTAATC	4060	12.850469	1
TCTTCCG	22320	11.712639	2
CCTTCCG	3675	10.49795	1
ACGCTCT	7975	10.326455	3
CTTCCGA	25660	10.118991	3
GGTAATC	7720	9.373371	1
TTCCGAT	27035	9.294539	4
CGCTCTT	11035	9.111716	1
CTCTTCC	28710	9.009602	1
TCCGATC	28020	8.811766	5
CTTTTTT	657580	8.697695	1
CCCGATC	2520	8.329008	1
GCTTCCG	3880	7.9855433	1
CACGACG	2100	7.899507	2
CTCGTAA	3655	7.821096	4
CCGATCT	31210	7.757846	6
CGACACG	1475	7.724802	1
GATACGG	2385	7.709756	2