FastQCFastQC Report
Wed 27 Apr 2022
EGAF00006127151

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006127151
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52948067
Sequences flagged as poor quality0
Sequence length46
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5044350.9526976688308564No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3781740.7142357057151869No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2659100.5022090797006811No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)