FastQCFastQC Report
Thu 12 May 2022
EGAF00006127168

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006127168
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences150047952
Sequences flagged as poor quality0
Sequence length31
%GC36

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA7010710.46723130216399084No Hit
CCTCTGCAAAAAAAAAAAAAAAAAAAAAAAA6652340.4433476039712958No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA5380130.35856070864599343No Hit
CATCATCTTACAAAAAAAAAAAAAAAAAAAA4781860.31868878823484376No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4124790.2748981205688166No Hit
CCTCTGCAATAAAAAAAAAAAAAAAAAAAAA3814730.25423405978909996No Hit
CTGAGGCCCAAAAAAAAAAAAAAAAAAAAAA3314590.22090204869973834No Hit
GGCTCAAAAAAAAAAAAAAAAAAAAAAAAAA3282870.21878805783367172No Hit
TCCGAATTCAAAAAAAAAAAAAAAAAAAAAA3280080.21860211727514947No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3196120.21300657272549775No Hit
TACAAAAAAAAAAAAAAAAAAAAAAAAAAAA2901240.19335418853300976No Hit
CATTTACGAGACCCGAAAAAAAAAAAAAAAA2496560.1663841436502912No Hit
CATCATCTTAAAAAAAAAAAAAAAAAAAAAA2479430.1652425086081815No Hit
GGACTGACAAAAAAAAAAAAAAAAAAAAAAA2371980.15808146451742308No Hit
GTGCCACTCAAAAAAAAAAAAAAAAAAAAAA2301090.15335697484228242No Hit
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2233430.14884774968471412No Hit
TTGCTCGAAAAAAAAAAAAAAAAAAAAAAAA2120570.1413261541883624No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2111230.14070368651216247No Hit
TTCTCAGATGTAAAAAAAAAAAAAAAAAAAA2023230.1348388947021416No Hit
CGGCCAAAAAAAAAAAAAAAAAAAAAAAAAA1998970.13322207823269724No Hit
GTACCAAAAAAAAAAAAAAAAAAAAAAAAAA1988480.13252296839079816No Hit
ATATGGGTGTAAAAAAAAAAAAAAAAAAAAA1953310.13017905102763416No Hit
TCAACTCACAAAAAAAAAAAAAAAAAAAAAA1948810.12987914690098537No Hit
GGGTTCAGGACAAAAAAAAAAAAAAAAAAAA1942080.12943062361824173No Hit
TACGATGGGACAAAAAAAAAAAAAAAAAAAA1870550.12466348091175546No Hit
ACATGTGTCGTTTCAAAAAAAAAAAAAAAAA1742170.11610754940527279No Hit
ACTGAAAAAAAAAAAAAAAAAAAAAAAAAAA1683300.1121841369750918No Hit
TGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA1664610.11093853516907715No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1603920.1068938281810071No Hit
TAAGGCCGGTTTCCAAAAAAAAAAAAAAAAA1532940.10216334042333346No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)