EGAF00006127170 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00006127170
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24271971
Sequences flagged as poor quality	0
Sequence length	31
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	75008	0.30903135143000954	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	66667	0.27466661030536005	No Hit
CCTCTGCAAAAAAAAAAAAAAAAAAAAAAAA	55397	0.22823445199403047	No Hit
CATCATCTTACAAAAAAAAAAAAAAAAAAAA	47333	0.19501094492902946	No Hit
CTGAGGCCCAAAAAAAAAAAAAAAAAAAAAA	40989	0.16887380097809115	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	37361	0.15392651878168442	No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	32848	0.1353330555643792	No Hit
CCTCTGCAATAAAAAAAAAAAAAAAAAAAAA	32549	0.13410118197652757	No Hit
TCCGAATTCAAAAAAAAAAAAAAAAAAAAAA	31312	0.12900476850437897	No Hit
TACAAAAAAAAAAAAAAAAAAAAAAAAAAAA	31112	0.12818077279344145	No Hit
CATCATCTTAAAAAAAAAAAAAAAAAAAAAA	27008	0.11127238080500343	No Hit
GTAGTCACAGCGAAAAAAAAAAAAAAAAAAA	26189	0.10789811836871427	No Hit
GTGCCACTCAAAAAAAAAAAAAAAAAAAAAA	25291	0.10419837762660478	No Hit
GCACCTCAAAAAAAAAAAAAAAAAAAAAAAA	24272	0.10000011947937809	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGCCCA	11705	24.772022	1
CAGCCGC	3115	24.645773	1
CGCGGCA	2680	24.630594	5
TGGCGCG	2555	24.61193	2
TGGGCCG	4405	24.609644	1
GGCGGGA	625	24.606918	1
GGGCGGC	1460	24.575386	3
GGGCCGT	3325	24.552183	2
GGCCGTA	3315	24.550974	3
GTGCGCA	4660	24.547457	3
GCGCCTG	10765	24.538994	3
GTCGCTA	4770	24.505552	3
AACGAGA	6440	24.47964	5
GGCGCCT	7660	24.464787	2
GAGGGCG	1360	24.455406	1
GGCAATC	2450	24.442476	5
GCGGGCA	1920	24.413082	9
AACGGCG	2325	24.412397	6
CGCGGCG	3795	24.41061	4
ACGGGCG	1635	24.39207	5